Jul 21, 2025 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and …

Standard Nucleotide BLAST BLASTN programs search nucleotide databases using a nucleotide query. more...

This title appears on all BLAST results and saved searches. Enter one or more queries in the top text box and one or more subject sequences in the lower text box. Then use the BLAST button at the …

Local alignments algorithms (such as BLAST) are most often used. A global alignment should only be used on sequences that share significant similarity over most of their extents, and then it will …

Welcome to BLAST Help ¶ Getting started ¶ Web BLAST quick start guide New BLAST databases New Guide to BLAST home and search pages Blast report description Blast topics Frequently Asked …

Smart Blast searches a protein query against the landmark database Enter Protein Query Sequence

The NCBI provides a suite of command-line tools to run BLAST called BLAST+. This allows users to perform BLAST searches on their own server without size, volume and database restrictions.

As genomic and other specialized sequence information is made available to the public, NCBI creates specialized BLAST pages for those sequences. The table below provides a general guide on how to …

The BLAST programs are command line programs that run BLAST searches against local, downloaded copies of the NCBI BLAST databases, or against custom databases formatted for BLAST.

Upload file : Your Saved Search Strategies (Click headers to sort columns) ... Please sign in to My NCBI to see your saved searches